Locatellid, J. Lawrimored, H. Linb,d, S. Sanaullah, C. Seitzb, D. Segall, P. Kefer, S. Moreno, B. Lietz, R. Anderson, J. Holmes, C. Yuan, G. Holzwarth, K. Bloom, J. Liu, K. Bonin, and P. A. Vidi, “DNA damage reduces heterogeneity and coherence of chromatin motions”, Proceedings of National Academy of Science (PNAS), 119, e2205166199 (2022).
D. Zhangb, C. Seitzb, F. Iqbalb, G. Changb, H. Linb, and J. Liua, “A guide for single-particle chromatin tracking in live cell nuclei”, Cell Biology International, 1-18 (2022).
W. T. Wu, F. Syed, E. Simpson, C.-C. Lee, J. Liu, G. Changb, C. P. Dong, C. Seitzb, D. L. Eizirik, R. G. Mirmira, Y. L. Liu, and C. Evans-Molina, “The Impact of Pro-Inflammatory Cytokines on Alternative Splicing Patterns in Human Islets” Diabetes, 71, 116 (2022). (Cover article)
CSBC/PS-ON Image Analysis Working Group (J. Liu), C. Vizcarra, E. A. Burlingame, C. B. Hug, Y. Goltsev, B. S. White, D. R. Tyson, and A. Sokolov, “A community-based approach to image analysis of cells, tissues and tumors”, Computerized Medical Imaging and Graphics, 95, 102013 (2022)
D. Zhangb, B. Y. Li, and J. Liua, “Monitoring Dark-State Dynamics of a Single Nitrogen-Vacancy Center in Nanodiamond by Auto-Correlation Spectroscopy: Photonionization and Recharging” Nanomaterials, 11, 979 (2021).
Fan, R. R. Zha, T. Sano, X. Y. Zhao, S. Z. Liu, M. D. Woollam, D. Wu, X. Sun, K. X. Li, M. Egi, F. J. Lib, K. Minami, A. Siegel, T. Horiuchi, J. Liu, M. Agarwal, A. Sudo, H. Nakshatri, B. Y. Li, and H. Yokota, “Mechanical tibia loading remotely suppresses brain tumors by the dopamine-mediated downregulation of CCN4”, Bone Research, 9, 26, (2021).
Z. Liu, D. Wu, X. Sun, Y. Fan, R. R. Zha, A. Jalali, Y. Feng, K. X. Li, T. Sano, N. Vike, F. J. Lib, J. Rispoli, A. Sudo, J. Liu, A. Robling, H. Nakshatri, B. Y. Li, and H. Yokota, “Overexpression of Lrp5 enhanced the anti-breast cancer effects of osteocytes in bone”, Bone Research, 9, 32 (2021).
Paul Kefer, Fadil Iqbal, Maelle Locatelli, Josh Lawrimore, Mengdi Zhang, Kerry Bloom, Keith Bonin, Pierre-Alexandre Vidi, and Jing Liu*, “Performance of deep learning restoration methods for the extraction of particle dynamics in noisy microscopy image sequences”, Molecular Biology of the Cell,32, 903-914 (2021).
Jing Liu*, Yaowu Hu, Prashant Kumar, Xingtao Liu, Joseph MK. Irudayaraj*, and Gary J. Cheng*, “Enhanced energy transfer from NV Centers to 3D Graphene Heterostructures by Laser Nanoshaping”, Advanced Optical Materials, 2001830 (2021).
Maithilee Motlag, Xingtao Liu, Ni Putu Dewi Nurmalasari, Shengyu Jin, Qiong Nian, Charles Park, Linrui Jin, Libai Huang, Jing Liu*, Gary J Cheng* “Molecular-Scale Nanodiamond with High-Density Color Centers Fabricated from Graphite by Laser Shocking”, Cell Reports Physical Science, 1, 100054 (2020).
Di Wu, Yao Fan, Shengzhi Liu, Mark D. Woollam, Xun Sun, Eiji Murao, Rongrong Zha, Rahul Prakash, Charles Park, Amanda Siegel, Jing Liu, Mangilal Agarwal, Bai-Yan Li*, and Hiroki Yokota*, “Loading-induced anti-tumor capability of murine and human urine”, FASEB Journal, 34, 7578 (2020).
Yao Fan, Aydin Jalali, Andy Chen, Xinyu Zhao, Shengzhi Liu, Meghana Teli, Yunxia Guo, Fangjia Li, Junrui Li, Amanda Siegel, Lianxiang Yang, Jing Liu, Sungsoo Na, Mangilal Agarwal, Alexander G. Robling, Harikrishna Nakshatri, Bai-Yan Li*, and Hiroki Yokota*, “Skeletal loading regulates breast cancer-associated tumor progression and osteolysis in a loading intensity-dependent fashion”, Bone Research, 8, 9 (2020).
R. G. Hart, D. Kota, F. Li, D. Ramallo, A. J. Price, K. L. Otterpohl, S. J. Smith, A. R. Dunn, J. Liu, and I. Chandrasekar. “Myosin II Tension Sensors Visualize Force Generation within the Actin Cytoskeleton in Living Cells”, BioRxiv, doi: https://doi.org/10.1101/623249 (2019)
J. Liu*, K. M. Haas, L. L. Parker, C. Chakraborty, S. J. Kron, K. Hodges, L. D. Miller, P. J. Robinson, S. A. Lelievre, and P. A. Vidi, “NuMA is a negative regulator of 53BP1 in DNA double-strand break repair”, Nucleic Acids Research, 47, 2703 (2019). (*co-first author, NAR breakthrough article)
F. Li, A. Chen, S. Liu, A. Reeser, Y. Wang, Y. Fan, X. Zhao, R. Prakash, B. Li, H. Yokota, and J. Liu, “Vinculin Force Sensor Detects Tumor-Osteocyte Interactions”, Scientific Reports, 9, 5615 (2019)
P. Kumar*, J. Liu*, Y. Hu, A. Bandopadhyay, S. K. Pati, J. Irudayara, and G. J. Cheng, “Laser Shock Tuning Dynamic Interlayer Coupling in Graphene–Boron Nitride Moiré Superlattices”, Nano Letters, 19, 283-291 (2019). (*co-first author)
P. Kumar, J. Liu, Y. Hu, SRKC Yamijala, X. Wang, S. K. Pati, J. Irudayaraj, and G. Cheng, “Lead Oxide: A New 2D Material with Visible Light Sensitivity”, Small, 14, 1703346 (2018)
Y. Cui, J. Liu, and J. Irudayaraj, “Beyond Quantification: In situ Analysis of Transcriptome and PremRNA Alternative Splicing at the Nanoscale”. WIREs Nanomedicine & Nanobiotechnology, 9, e1443 (2017)
S. Bogdanov, M. Y. Shalaginov, A. Akimov, A. S. Lagutchev, P. Kapitanova, J. Liu, D. Woods, M. Ferrera, P. Belov, J. Irudayaraj, A. Boltasseva, and V. M. Shalaev, “Electron spin contrast of Purcellenhanced nitrogen-vacancy ensembles in nanodiamonds”. Phys. Rev. B 96, 035146 (2017)
J. Liu, and J. Irudayaraj, “Non-fluorescent quantification of single mRNA with transient absorption microscopy”, Nanoscale, 8, 19242-19248 (2016)
Y. Cui, X. Wang, W. Ren, J. Liu, and J. Irudayaraj, “Optical Clearing Delivers Ultrasensitive Hyperspectral Dark-Field Imaging for Single-Cell Evaluation”, ACS Nano, 10, 3132-3143 (2016)
J. Liu, I. Cho, N. Damayanti, and J. Irudayaraj, “Single Molecule Detection in Cancer Tissues using Second Harmonic Generation Nanocrystals”, Journal of Biomedical Optics 20, 096016 (2015)
J. Liu, P. Vidi, S. A. Lelièvre, and J. M. K. Irudayaraj, “Nanoscale Histone Localization in Live Cells Reveals Reduced Chromatin Mobility in Response to DNA Damage”, Journal of Cell Science, 128, 599-604 (2015)
J. Liu, P. Kumar, Y. Hu, G. Cheng, and J. Irudayaraj, “Enhanced Multi-photon Emission from CdTe/ZnS Quantum Dots Decorated on Single Layer Graphene”, Journal of Physical Chemistry C, 119, 6331-6336 (2015)
M. Y. Shalaginov, V. V. Vorobyov, J. Liu, M. Ferrera, A. V. Akimov, A. Lagutchev, A. N. Smolyaninov, V. V. Klimov, J. Irudayaraj, A. V. Kildishev, A. Boltasseva, and V. M. Shalaev, “Enhancement of Single-Photon Emission from Nitrogen-Vacancy centers with TiN/(AlSc)N Hyperbolic Metamaterial”. Laser & Photonics Reviews, 9, 120-127 (2015)
J. Liu, I. Cho, Y. Cui, and J. Irudayaraj, “Second Harmonic Super-resolution Microscopy for Quantification of mRNA at Single Copy Sensitivity”, ACS Nano, 8, 12418-27 (2014)
P. Vidi, J. Liu, S. Jayaraman, G. Dorfman, D. Salles, M.Gray, P. Abad, P. V. Moghe, J. M. K. Irudayaraj, L. Wiesmüller, and S. A. Lelièvre, “NuMA Promotes Homologous Recombination Repair by Regulating the Accumulation of the ISWI ATPase SNF2h at DNA Breaks”, Nucleic Acids Research, 42, 6365-6379 (2014)
G. Naik, B. Saha, J. Liu, S. M. Saber, E. Satach, J. Irudayaraj, T. D. Sands, V. M. Shalaev, and A. Boltasseva, “Epitaxial superlattices with titanium nitride as a plasmonic component for optical hyperbolic metamaterials”. Proceedings of the National Academy of Sciences, 1319446111 (2014)
Patent
J. Liu, and J. Wei, “Single Beam Parameter Tunable Z-scan Measurement”. Issued Data: 04/20/2011, China, Issued No.: ZL 2009 1 0054823.1